ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5wy0A1 - ECOD Domain | ECOD

ECOD/Domains/e5wy0A1

e5wy0A1

UID: 002142044

PDB

Range: A:0-55,A:75-228
PDB: 5WY0 chain A(all domains)
UniProt: Q5T8I9 (all domains)
Gene: HENMT1

Molecule: Small RNA 2'-O-methyltransferase

3D Structure

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Related Domains

Browse other domains in Methyltransf_23 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyMethyltransf_23(2003.1.5.79)

Ligands

in contact, ≤ 4 Å

AdemetionineSAM
drugDrugBank DB00118

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF13489Methyltransf_23

Methyltransferase domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5WY0 RCSB PDB: 5WY0 PDBe: 5WY0 UniProt: Q5T8I9

Downloads

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