ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6biiA2 - ECOD Domain | ECOD

ECOD/Domains/e6biiA2

e6biiA2

UID: 002142114

PDB

Range: A:100-292
PDB: 6BII chain A(all domains)
UniProt: F8AEA4 (all domains)
Gene: gyaR

Molecule: Glyoxylate reductase

3D Structure

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Related Domains

Browse other domains in 2-Hacid_dh_C, F420_oxidored →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamily2-Hacid_dh_C, F420_oxidored(2003.1.1.159)

Ligands

in contact, ≤ 4 Å

Nicotinamide adenine dinucleotide phosphateNAP
drugDrugBank DB03461

+ 2 additives (Glycerin, Malonate Ion)

GlycerinGOL
DrugBank DB09462

Pfam Families

PF028262-Hacid_dh_C

D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain

ClanCL0063NADP_Rossmann

PF03807F420_oxidored

NADP oxidoreductase coenzyme F420-dependent

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 6BII RCSB PDB: 6BII PDBe: 6BII UniProt: F8AEA4

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Malonate IonMLI

DrugBank DB02201

Shown in the structure viewer. Drug annotations from DrugDomain.