ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5o7eA1 - ECOD Domain | ECOD

ECOD/Domains/e5o7eA1

e5o7eA1

UID: 002142565

PDB

Range: A:342-606
PDB: 5O7E chain A(all domains)
UniProt: Q46085 (all domains)
Gene: colH

Molecule: ColH protein

3D Structure

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Related Domains

Browse other domains in Peptidase_M9 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupZincin-like(2498)

HH-groupMetalloproteases ("zincins") catalytic domain(2498.1)

TT-groupMetalloproteases ("zincins") catalytic domain(2498.1.1)

FFamilyPeptidase_M9(2498.1.1.16)

Ligands

in contact, ≤ 4 Å

~{N}-(4-ethanoylphenyl)-2-sulfanyl-ethanamide9NB
Calcium ionCA
metal
Zinc ionZN

Pfam Families

PF01752Peptidase_M9

Collagenase

ClanCL0126Peptidase_MA

External Links

ECOD PDB View: 5O7E RCSB PDB: 5O7E PDBe: 5O7E UniProt: Q46085

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

Shown in the structure viewer. Drug annotations from DrugDomain.