ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1vfsB1 - ECOD Domain | ECOD

ECOD/Domains/e1vfsB1

e1vfsB1

UID: 000021436

PDB

Range: B:1004-1012,B:1250-1384
PDB: 1VFS chain B(all domains)
UniProt: Q65YW7 (all domains)
Gene: alr

Molecule: alanine racemase

3D Structure

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Related Domains

Browse other domains in Ala_racemase_C →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupAlanine racemase-C(1.1.7)

FFamilyAla_racemase_C(1.1.7.6)

Ligands

in contact, ≤ 4 Å

D-[3-hydroxy-2-methyl-5-phosphonooxymethyl-pyridin-4-ylmethyl]-N,O-cycloserylamideDCS
drugDrugBank DB02038

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00842Ala_racemase_C

Alanine racemase, C-terminal domain

ClanCL0866ALR_C-like

External Links

ECOD PDB View: 1VFS RCSB PDB: 1VFS PDBe: 1VFS UniProt: Q65YW7

Downloads

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