ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5k4qE1 - ECOD Domain | ECOD

ECOD/Domains/e5k4qE1

e5k4qE1

UID: 002146012

PDB

Range: E:5003-5321
PDB: 5K4Q chain E(all domains)
UniProt: Q7YW97 (all domains)

Molecule: L-threonine 3-dehydrogenase

3D Structure

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Related Domains

Browse other domains in Epimerase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyEpimerase(2003.1.1.20)

Ligands

in contact, ≤ 4 Å

NadideNAD
drugDrugBank DB14128

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer.

Pfam Families

PF01370Epimerase

NAD dependent epimerase/dehydratase family

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5K4Q RCSB PDB: 5K4Q PDBe: 5K4Q UniProt: Q7YW97

Downloads

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Drug annotations from DrugDomain.