ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5k4vA1 - ECOD Domain | ECOD

ECOD/Domains/e5k4vA1

e5k4vA1

UID: 002146016

PDB

Range: A:1002-1321
PDB: 5K4V chain A(all domains)
UniProt: Q7YW97 (all domains)

Molecule: L-threonine 3-dehydrogenase

3D Structure

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Related Domains

Browse other domains in Epimerase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyEpimerase(2003.1.1.20)

Ligands

in contact, ≤ 4 Å

NadideNAD
drugDrugBank DB14128
Sodium ionNA
metal

+ 2 additives (Acetate, Glycerin)

AcetateACT

Pfam Families

PF01370Epimerase

NAD dependent epimerase/dehydratase family

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5K4V RCSB PDB: 5K4V PDBe: 5K4V UniProt: Q7YW97

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14511

GlycerinGOL

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.