ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5na8B1 - ECOD Domain | ECOD

ECOD/Domains/e5na8B1

e5na8B1

UID: 002146113

PDB

Range: B:24-674
PDB: 5NA8 chain B(all domains)
UniProt: Q8A6N1 (all domains)
Gene: BT_1846

Molecule: Putative dipeptidyl-peptidase III

3D Structure

Loading viewer...

Related Domains

Browse other domains in Peptidase_M49 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupZincin-like(2498)

HH-groupMetalloproteases ("zincins") catalytic domain(2498.1)

TT-groupMetalloproteases ("zincins") catalytic domain(2498.1.1)

FFamilyPeptidase_M49(2498.1.1.23)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF03571Peptidase_M49

Peptidase family M49

ClanCL0126Peptidase_MA

External Links

ECOD PDB View: 5NA8 RCSB PDB: 5NA8 PDBe: 5NA8 UniProt: Q8A6N1

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure