ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5nj2B2 - ECOD Domain | ECOD

ECOD/Domains/e5nj2B2

e5nj2B2

UID: 002146138

PDB

Range: B:67-182
PDB: 5NJ2 chain B(all domains)
UniProt: P9WKD3 (all domains)
Gene: blaC

Molecule: Beta-lactamase

3D Structure

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Related Domains

Browse other domains in Beta-lactamase2 →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupalpha-helical domain in beta-lactamase/transpeptidase-like proteins(4019)

HH-groupalpha-helical domain in beta-lactamase/transpeptidase-like proteins(4019.1)

TT-groupalpha-helical domain in beta-lactamase/transpeptidase-like proteins(4019.1.1)

FFamilyBeta-lactamase2(4019.1.1.6)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Phosphate ion, Acetate)

Phosphate ionPO4
DrugBank DB14523
AcetateACT
DrugBank DB14511within 5 Å only

Shown in the structure viewer.

Pfam Families

PF13354Beta-lactamase2

Beta-lactamase enzyme family

ClanCL0013Beta-lactamase

External Links

ECOD PDB View: 5NJ2 RCSB PDB: 5NJ2 PDBe: 5NJ2 UniProt: P9WKD3

Downloads

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Drug annotations from DrugDomain.