ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1twiD1 - ECOD Domain | ECOD

ECOD/Domains/e1twiD1

e1twiD1

UID: 000021463

PDB

Range: D:15-49,D:314-448
PDB: 1TWI chain D(all domains)
UniProt: Q58497 (all domains)
Gene: lysA

Molecule: Diaminopimelate decarboxylase

3D Structure

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Related Domains

Browse other domains in Orn_DAP_Arg_deC →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupAlanine racemase-C(1.1.7)

FFamilyOrn_DAP_Arg_deC(1.1.7.1)

Ligands

in contact, ≤ 4 Å

Pyridoxal phosphatePLP
drugDrugBank DB00114
LysineLYS

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00278Orn_DAP_Arg_deC

Pyridoxal-dependent decarboxylase, C-terminal sheet domain

ClanCL0866ALR_C-like

External Links

ECOD PDB View: 1TWI RCSB PDB: 1TWI PDBe: 1TWI UniProt: Q58497

Downloads

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