ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5v92B1 - ECOD Domain | ECOD

ECOD/Domains/e5v92B1

e5v92B1

UID: 002146325

PDB

Range: B:1-129
PDB: 5V92 chain B(all domains)
UniProt: P00705 (all domains)

Molecule: lysozyme isoform III

3D Structure

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Related Domains

Browse other domains in Lys →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupLysozyme-like(235)

HH-groupLysozyme-like(235.1)

TT-groupLysozyme-like(235.1.1)

FFamilyLys(235.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Phosphate ion, Tromethamine)

Phosphate ionPO4
DrugBank DB14523
TromethamineTRS
DrugBank DB03754

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

C-type lysozyme/alpha-lactalbumin family

ClanCL0037Lysozyme

External Links

ECOD PDB View: 5V92 RCSB PDB: 5V92 PDBe: 5V92 UniProt: P00705

Downloads

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