ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ws8C2 - ECOD Domain | ECOD

ECOD/Domains/e5ws8C2

e5ws8C2

UID: 002146485

PDB

Range: C:71-166
PDB: 5WS8 chain C(all domains)
UniProt: P9WKE5 (all domains)
Gene: pyk

Molecule: Pyruvate kinase

3D Structure

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Related Domains

Browse other domains in PK →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupPK beta-barrel domain-like(1.1.15)

FFamilyPK(1.1.15.1)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metalwithin 5 Å only

+ 1 additive (Oxalate ion)

Oxalate ionOXL
within 5 Å only

Shown in the structure viewer. Drug annotations from .

Pfam Families

Pyruvate kinase, barrel domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 5WS8 RCSB PDB: 5WS8 PDBe: 5WS8 UniProt: P9WKE5

Downloads

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