ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5wsbB3 - ECOD Domain | ECOD

ECOD/Domains/e5wsbB3

e5wsbB3

UID: 002146519

PDB

Range: B:2-70,B:167-344
PDB: 5WSB chain B(all domains)
UniProt: P9WKE5 (all domains)
Gene: pyk

Molecule: Pyruvate kinase

3D Structure

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Related Domains

Browse other domains in PK →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyPK(2002.1.1.11)

Ligands

in contact, ≤ 4 Å

alpha-D-glucose 6-phosphateG6P
drugDrugBank DB02007
Potassium ionK
metal
Magnesium ion

Pfam Families

Pyruvate kinase, barrel domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 5WSB RCSB PDB: 5WSB PDBe: 5WSB UniProt: P9WKE5

Downloads

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metal

+ 1 additive (Oxalate ion)

Oxalate ionOXL

Shown in the structure viewer. Drug annotations from DrugDomain.