ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5wsbD3 - ECOD Domain | ECOD

ECOD/Domains/e5wsbD3

e5wsbD3

UID: 002146525

PDB

Range: D:71-166
PDB: 5WSB chain D(all domains)
UniProt: P9WKE5 (all domains)
Gene: pyk

Molecule: Pyruvate kinase

3D Structure

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Related Domains

Browse other domains in PK →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupPK beta-barrel domain-like(1.1.15)

FFamilyPK(1.1.15.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Phosphate ion, Oxalate ion)

Phosphate ionPO4
DrugBank DB14523within 5 Å only
Oxalate ionOXL
within 5 Å only

Shown in the structure viewer. Drug annotations from .

Pfam Families

Pyruvate kinase, barrel domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 5WSB RCSB PDB: 5WSB PDBe: 5WSB UniProt: P9WKE5

Downloads

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