ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ye5B2 - ECOD Domain | ECOD

ECOD/Domains/e5ye5B2

e5ye5B2

UID: 002147351

PDB

Range: B:89-198,B:220-294
PDB: 5YE5 chain B(all domains)
UniProt: Q99J21 (all domains)
Gene: Mcoln1

Molecule: mammalian endo-lysosomal TRPML1 channel

3D Structure

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Related Domains

Browse other domains in MCLN_ECD →

Classification

AArchitecturea+b two layers(a.11)

XX-groupPolycystin-mucolipin domain(1116)

HH-groupPolycystin-mucolipin domain(1116.1)

TT-groupPolycystin-mucolipin domain(1116.1.1)

FFamilyMCLN_ECD(1116.1.1.2)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF21381MCLN_ECD

Mucolipin, extracytosolic domain

External Links

ECOD PDB View: 5YE5 RCSB PDB: 5YE5 PDBe: 5YE5 UniProt: Q99J21

Downloads

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