ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5lu5B1 - ECOD Domain | ECOD

ECOD/Domains/e5lu5B1

e5lu5B1

UID: 002147879

PDB

Range: B:3-195
PDB: 5LU5 chain B(all domains)
UniProt: Q93UJ2 (all domains)
Gene: gmhA

Molecule: Phosphoheptose isomerase

3D Structure

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Related Domains

Browse other domains in SIS_2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupRibosomal protein S2/SIS domain(2007.6)

TT-groupRibosomal protein S2/SIS domain(2007.6.1)

FFamilySIS_2(2007.6.1.8)

Ligands

in contact, ≤ 4 Å

D-Glycero-D-Mannopyranose-7-PhosphateM7P
drugDrugBank DB02470

+ 2 additives (Glycerin, Tetraethylene glycol)

GlycerinGOL
DrugBank DB09462

Pfam Families

SIS domain

ClanCL0067SIS

External Links

ECOD PDB View: 5LU5 RCSB PDB: 5LU5 PDBe: 5LU5 UniProt: Q93UJ2

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Tetraethylene glycolPG4

Shown in the structure viewer. Drug annotations from DrugDomain.