ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5o37A1 - ECOD Domain | ECOD

ECOD/Domains/e5o37A1

e5o37A1

UID: 002148046

PDB

Range: A:2-103,A:201-262
PDB: 5O37 chain A(all domains)
UniProt: O69052 (all domains)
Gene: ptxB

Molecule: Probable phosphite transport system-binding protein PtxB

3D Structure

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Related Domains

Browse other domains in Phosphonate-bd →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyPhosphonate-bd(7523.1.1.25)

Ligands

in contact, ≤ 4 Å

Methylphosphonic acid ester groupGB

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF12974Phosphonate-bd

ABC transporter, phosphonate, periplasmic substrate-binding protein

ClanCL0177PBP

External Links

ECOD PDB View: 5O37 RCSB PDB: 5O37 PDBe: 5O37 UniProt: O69052

Downloads

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