ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5u29C1 - ECOD Domain | ECOD

ECOD/Domains/e5u29C1

e5u29C1

UID: 002148236

PDB

Range: C:275-461
PDB: 5U29 chain C(all domains)
UniProt: J9VFT1 (all domains)
Gene: CNAG_00797

Molecule: Acetyl-coenzyme A synthetase

3D Structure

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Related Domains

Browse other domains in AMP-binding →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCoA-dependent acyltransferases(323)

HH-groupCoA-dependent acyltransferases(323.1)

TT-groupCoA-dependent acyltransferases(323.1.1)

FFamilyAMP-binding(323.1.1.3)

Ligands

in contact, ≤ 4 Å

5'-O-(acetylsulfamoyl)adenosine7RM

+ 2 additives (Phosphate ion, 1,2-ETHANEDIOL)

Phosphate ionPO4
DrugBank DB14523
1,2-ETHANEDIOLEDO

Pfam Families

PF00501AMP-binding

AMP-binding enzyme

ClanCL0378ANL

External Links

ECOD PDB View: 5U29 RCSB PDB: 5U29 PDBe: 5U29 UniProt: J9VFT1

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.