ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5up4G2 - ECOD Domain | ECOD

ECOD/Domains/e5up4G2

e5up4G2

UID: 002148292

PDB

Range: G:147-221
PDB: 5UP4 chain G(all domains)
UniProt: B6DRA0 (all domains)
Gene: gag

Molecule: HIV-1 Capsid Protein and spacer peptide 1

3D Structure

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Related Domains

Browse other domains in Gag_p24_C →

Classification

AArchitecturealpha bundles(a.7)

XX-groupRetrovirus capsid protein(170)

HH-groupRetrovirus capsid protein-C(170.1)

TT-groupRetrovirus capsid protein-C(170.1.1)

FFamilyGag_p24_C(170.1.1.5)

Pfam Families

PF19317Gag_p24_C

Gag protein p24 C-terminal domain

ClanCL0148Viral_Gag

External Links

ECOD PDB View: 5UP4 RCSB PDB: 5UP4 PDBe: 5UP4 UniProt: B6DRA0

Downloads

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