ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5verA2 - ECOD Domain | ECOD

ECOD/Domains/e5verA2

e5verA2

UID: 002148312

PDB

Range: A:42-338
PDB: 5VER chain A(all domains)
UniProt: Q71RI9 (all domains)
Gene: Kyat3

Molecule: Kynurenine--oxoglutarate transaminase 3

3D Structure

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Related Domains

Browse other domains in Aminotran_1_2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPLP-dependent transferases(7577)

HH-groupPLP-dependent transferases(7577.1)

TT-groupPLP-dependent transferases(7577.1.1)

FFamilyAminotran_1_2(7577.1.1.1)

Ligands

in contact, ≤ 4 Å

Pyridoxal phosphatePLP
drugDrugBank DB00114
Pyridoxamine-5'-PhosphatePMP
drugDrugBank DB02142

Pfam Families

PF00155Aminotran_1_2

Aminotransferase class I and II

ClanCL0061PLP_aminotran

External Links

ECOD PDB View: 5VER RCSB PDB: 5VER PDBe: 5VER UniProt: Q71RI9

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Calcium ion

metal

+ 3 additives (HEPES, Glycerin, Triethylene glycol)

HEPESEPE
DrugBank DB16872
GlycerinGOL
DrugBank DB09462
Triethylene glycolPGE
DrugBank DB02327

Shown in the structure viewer. Drug annotations from DrugDomain.