ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5vu2K1 - ECOD Domain | ECOD

ECOD/Domains/e5vu2K1

e5vu2K1

UID: 002148381

PDB

Range: K:113-261
PDB: 5VU2 chain K(all domains)
UniProt: Q5XXP3 (all domains)

Molecule: capsid protein

3D Structure

Loading viewer...

Related Domains

Browse other domains in Peptidase_S3 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupFMN-binding split barrel(1.1.5)

FFamilyPeptidase_S3(1.1.5.4)

Pfam Families

PF00944Peptidase_S3

Alphavirus core protein

ClanCL0124Peptidase_PA

External Links

ECOD PDB View: 5VU2 RCSB PDB: 5VU2 PDBe: 5VU2 UniProt: Q5XXP3

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure