ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6bm7F1 - ECOD Domain | ECOD

ECOD/Domains/e6bm7F1

e6bm7F1

UID: 002149393

PDB

Range: F:4-324
PDB: 6BM7 chain F(all domains)
UniProt: A5HNV6 (all domains)

Molecule: Inactive S-adenosylmethionine decarboxylase prozyme

3D Structure

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Related Domains

Browse other domains in SAM_decarbox →

Classification

AArchitecturea+b two layers(a.11)

XX-groupTBP-like(331)

HH-groupS-adenosylmethionine decarboxylase-related(331.10)

TT-groupS-adenosylmethionine decarboxylase(331.10.1)

FFamilySAM_decarbox(331.10.1.1)

Ligands

in contact, ≤ 4 Å

PutrescinePUT
drugDrugBank DB01917

+ 1 additive (Tetraethylene glycol)

Tetraethylene glycolPG4

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01536SAM_decarbox

Adenosylmethionine decarboxylase

External Links

ECOD PDB View: 6BM7 RCSB PDB: 6BM7 PDBe: 6BM7 UniProt: A5HNV6

Downloads

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