ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6ei9B1 - ECOD Domain | ECOD

ECOD/Domains/e6ei9B1

e6ei9B1

UID: 002150180

PDB

Range: B:1-42,B:62-319
PDB: 6EI9 chain B(all domains)
UniProt: P0ABT5 (all domains)
Gene: dusB

Molecule: tRNA-dihydrouridine synthase B

3D Structure

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Related Domains

Browse other domains in Dus →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyDus(2002.1.1.56)

Ligands

in contact, ≤ 4 Å

Flavin mononucleotideFMN
drugDrugBank DB03247

+ 3 additives (HEPES, Glycerin, Sulfate ion)

HEPESEPE
DrugBank DB16872

Pfam Families

Dihydrouridine synthase (Dus)

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 6EI9 RCSB PDB: 6EI9 PDBe: 6EI9 UniProt: P0ABT5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

GlycerinGOL

DrugBank DB09462

Sulfate ionSO4

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.