ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6ex0B1 - ECOD Domain | ECOD

ECOD/Domains/e6ex0B1

e6ex0B1

UID: 002150728

PDB

Range: B:32-230
PDB: 6EX0 chain B(all domains)
UniProt: W8U368 (all domains)
Gene: ywaC

Molecule: GTP pyrophosphokinase

3D Structure

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Related Domains

Browse other domains in RelA_SpoT →

Classification

AArchitecturea+b three layers(a.12)

XX-groupNucleotidyltransferase-like(316)

HH-groupNucleotidyltransferase(316.1)

TT-groupNucleotidyltransferase(316.1.1)

FFamilyRelA_SpoT(316.1.1.13)

Ligands

in contact, ≤ 4 Å

FE (II) IONFE2
metal
guanosine 5'-(tetrahydrogen triphosphate) 3'-(trihydrogen diphosphate)0O2
within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF04607RelA_SpoT

Region found in RelA / SpoT proteins

ClanCL0260NTP_transf

External Links

ECOD PDB View: 6EX0 RCSB PDB: 6EX0 PDBe: 6EX0 UniProt: W8U368

Downloads

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