ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5lpaB1 - ECOD Domain | ECOD

ECOD/Domains/e5lpaB1

e5lpaB1

UID: 002151371

PDB

Range: B:2-157
PDB: 5LPA chain B(all domains)
UniProt: Q8ZPX9 (all domains)
Gene: aadA

Molecule: Streptomycin 3''-adenylyltransferase

3D Structure

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Related Domains

Browse other domains in Polbeta →

Classification

AArchitecturea+b three layers(a.12)

XX-groupNucleotidyltransferase-like(316)

HH-groupNucleotidyltransferase(316.1)

TT-groupNucleotidyltransferase(316.1.1)

FFamilyPolbeta(316.1.1.27)

Ligands

in contact, ≤ 4 Å

Dihydrostreptomycin71R
drugDrugBank DB11512
ATPATP
drugDrugBank DB00171
Calcium ion

Pfam Families

PF18765Polbeta

Polymerase beta, Nucleotidyltransferase

ClanCL0260NTP_transf

External Links

ECOD PDB View: 5LPA RCSB PDB: 5LPA PDBe: 5LPA UniProt: Q8ZPX9

Downloads

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metal

Chloride ionCL

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.