ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5lw1B1 - ECOD Domain | ECOD

ECOD/Domains/e5lw1B1

e5lw1B1

UID: 002151379

PDB

Range: B:8-362
PDB: 5LW1 chain B(all domains)
UniProt: P45983 (all domains)
Gene: MAPK8

Molecule: Mitogen-activated protein kinase 8

3D Structure

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Related Domains

Browse other domains in Pkinase, Kdo →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupProtein kinase/SAICAR synthase/ATP-grasp(206)

HH-groupProtein kinase/SAICAR synthase/ATP-grasp(206.1)

TT-groupProtein kinase(206.1.1)

FFamilyPkinase, Kdo(206.1.1.71)

Ligands

in contact, ≤ 4 Å

AdenosineADN
drugDrugBank DB00640

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer.

Pfam Families

PF00069Pkinase

Protein kinase domain

ClanCL0016PKinase

Lipopolysaccharide kinase (Kdo/WaaP) family

ClanCL0016PKinase

External Links

ECOD PDB View: 5LW1 RCSB PDB: 5LW1 PDBe: 5LW1 UniProt: P45983

Downloads

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Drug annotations from DrugDomain.