ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5m3cB1 - ECOD Domain | ECOD

ECOD/Domains/e5m3cB1

e5m3cB1

UID: 002151392

PDB

Range: B:809-974
PDB: 5M3C chain B(all domains)
UniProt: Q9I5W1 (all domains)
Gene: PA0575

Molecule: Diguanylate cyclase

3D Structure

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Related Domains

Browse other domains in GGDEF →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48)

TT-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48.1)

FFamilyGGDEF(304.48.1.14)

Ligands

in contact, ≤ 4 Å

Guanosine-5'-TriphosphateGTP
drugDrugBank DB04137
Calcium ionCA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Diguanylate cyclase, GGDEF domain

ClanCL0276Nucleot_cyclase

External Links

ECOD PDB View: 5M3C RCSB PDB: 5M3C PDBe: 5M3C UniProt: Q9I5W1

Downloads

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