ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5m6kA1 - ECOD Domain | ECOD

ECOD/Domains/e5m6kA1

e5m6kA1

UID: 002151410

PDB

Range: A:2-185
PDB: 5M6K chain A(all domains)
UniProt: Q6PQK2 (all domains)

Molecule: Nitrophorin-7

3D Structure

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Related Domains

Browse other domains in Nitrophorin →

Classification

AArchitecturebeta barrels(a.1)

XX-groupLipocalins/Streptavidin(9)

HH-groupLipocalins(9.1)

TT-groupLipocalins(9.1.1)

FFamilyNitrophorin(9.1.1.2)

Ligands

in contact, ≤ 4 Å

FerrohemeHEM
drugDrugBank DB18267

+ 1 additive (Imidazole)

ImidazoleIMD
DrugBank DB03366

Shown in the structure viewer.

Pfam Families

PF02087Nitrophorin

Nitrophorin

ClanCL0116Calycin

External Links

ECOD PDB View: 5M6K RCSB PDB: 5M6K PDBe: 5M6K UniProt: Q6PQK2

Downloads

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Drug annotations from DrugDomain.