ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5m83A1 - ECOD Domain | ECOD

ECOD/Domains/e5m83A1

e5m83A1

UID: 002151433

PDB

Range: A:31-217
PDB: 5M83 chain A(all domains)
UniProt: P63073 (all domains)
Gene: Eif4e

Molecule: Eukaryotic translation initiation factor 4E

3D Structure

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Related Domains

Browse other domains in IF4E →

Classification

AArchitecturea+b two layers(a.11)

XX-groupTranslation initiation factor eIF4e and phosphothreonine lyase(317)

HH-groupTranslation initiation factor eIF4e and phosphothreonine lyase(317.1)

TT-groupTranslation initiation factor eIF4e and phosphothreonine lyase(317.1.1)

FFamilyIF4E(317.1.1.1)

Ligands

in contact, ≤ 4 Å

[[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-sulfanyl-phosphoryl] [(2~{R},3~{R},4~{R},5~{R})-5-(2-azanyl-7-methyl-6-oxidanyl-purin-7-ium-9-yl)-4-methoxy-3-oxidanyl-oxolan-2-yl]methyl hydrogen phosphateYDZ

+ 1 additive (Glycerin)

GlycerinGOL

Pfam Families

Eukaryotic initiation factor 4E

ClanCL0625eIF4e

External Links

ECOD PDB View: 5M83 RCSB PDB: 5M83 PDBe: 5M83 UniProt: P63073

Downloads

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DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.