ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5ndgm71 - ECOD Domain | ECOD

ECOD/Domains/e5ndgm71

e5ndgm71

UID: 002152135

PDB

Range: m7:2-184
PDB: 5NDG chain m7(all domains)
UniProt: P05740 (all domains)
Gene: RPL17A

Molecule: 60S ribosomal protein L17-A

3D Structure

Loading viewer...

Related Domains

Browse other domains in Ribosomal_L22 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupEnolase-N/ribosomal protein(218)

HH-groupRibosomal protein L22(218.2)

TT-groupRibosomal protein L22(218.2.1)

FFamilyRibosomal_L22(218.2.1.1)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00237Ribosomal_L22

Ribosomal protein L22p/L17e

External Links

ECOD PDB View: 5NDG RCSB PDB: 5NDG PDBe: 5NDG UniProt: P05740

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure