ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ndgo71 - ECOD Domain | ECOD

ECOD/Domains/e5ndgo71

e5ndgo71

UID: 002152161

PDB

Range: o7:2-83
PDB: 5NDG chain o7(all domains)
UniProt: P49166 (all domains)
Gene: RPL37A

Molecule: 60S ribosomal protein L37-A

3D Structure

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Related Domains

Browse other domains in Ribosomal_L37e →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupRubredoxin-related(375.1)

TT-groupRubredoxin-related(375.1.1)

FFamilyRibosomal_L37e(375.1.1.16)

Ligands

in contact, ≤ 4 Å

GeneticinGET
drugDrugBank DB04263within 5 Å only
Magnesium ionMG
metal
Zinc ion

Pfam Families

PF01907Ribosomal_L37e

Ribosomal protein L37e

ClanCL0167Zn_Beta_Ribbon

External Links

ECOD PDB View: 5NDG RCSB PDB: 5NDG PDBe: 5NDG UniProt: P49166

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.