ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ndgq31 - ECOD Domain | ECOD

ECOD/Domains/e5ndgq31

e5ndgq31

UID: 002152167

PDB

Range: q3:2-92
PDB: 5NDG chain q3(all domains)
UniProt: P0CX25 (all domains)
Gene: RPL43A

Molecule: 60S ribosomal protein L43-A

3D Structure

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Related Domains

Browse other domains in Ribosomal_L37ae →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupRubredoxin-related(375.1)

TT-groupRubredoxin-related(375.1.1)

FFamilyRibosomal_L37ae(375.1.1.13)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01780Ribosomal_L37ae

Ribosomal L37ae protein family

ClanCL0167Zn_Beta_Ribbon

External Links

ECOD PDB View: 5NDG RCSB PDB: 5NDG PDBe: 5NDG UniProt: P0CX25

Downloads

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