ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5nfrO1 - ECOD Domain | ECOD

ECOD/Domains/e5nfrO1

e5nfrO1

UID: 002152586

PDB

Range: O:140-313
PDB: 5NFR chain O(all domains)
UniProt: C6KT25 (all domains)
Gene: PF3D7_0618500

Molecule: Malate dehydrogenase

3D Structure

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Related Domains

Browse other domains in Ldh_1_C →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupLDH C-terminal domain-like(279)

HH-groupLDH C-terminal domain-like(279.1)

TT-groupLDH C-terminal domain-like(279.1.1)

FFamilyLdh_1_C(279.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Citric acid)

Citric acidCIT
DrugBank DB04272

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02866Ldh_1_C

lactate/malate dehydrogenase, alpha/beta C-terminal domain

ClanCL0341LDH_C

External Links

ECOD PDB View: 5NFR RCSB PDB: 5NFR PDBe: 5NFR UniProt: C6KT25

Downloads

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