ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5nnwC1 - ECOD Domain | ECOD

ECOD/Domains/e5nnwC1

e5nnwC1

UID: 002152669

PDB

Range: C:1-213
PDB: 5NNW chain C(all domains)
UniProt: Q9SPD4 (all domains)
Gene: SD21-1

Molecule: 25 kDa protein elicitor

3D Structure

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Related Domains

Browse other domains in NPP1 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupNecrosis and ethylene-inducing peptide 1-like proteins(3080)

HH-groupNecrosis and ethylene-inducing peptide 1-like proteins(3080.1)

TT-groupNecrosis and ethylene-inducing peptide 1-like proteins(3080.1.1)

FFamilyNPP1(3080.1.1.1)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Necrosis inducing protein (NPP1)

External Links

ECOD PDB View: 5NNW RCSB PDB: 5NNW PDBe: 5NNW UniProt: Q9SPD4

Downloads

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