ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5nqaB2 - ECOD Domain | ECOD

ECOD/Domains/e5nqaB2

e5nqaB2

UID: 002152680

PDB

Range: B:440-578
PDB: 5NQA chain B(all domains)
UniProt: Q8N4A0 (all domains)
Gene: GALNT4

Molecule: Polypeptide N-acetylgalactosaminyltransferase 4

3D Structure

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Related Domains

Browse other domains in Ricin_B_lectin →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-Trefoil(6)

HH-groupbeta-Trefoil(6.1)

TT-groupbeta-Trefoil(6.1.1)

FFamilyRicin_B_lectin(6.1.1.4)

Ligands

in contact, ≤ 4 Å

2-acetamido-2-deoxy-beta-D-galactopyranoseNGA

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00652Ricin_B_lectin

Ricin-type beta-trefoil lectin domain

ClanCL0066Trefoil

External Links

ECOD PDB View: 5NQA RCSB PDB: 5NQA PDBe: 5NQA UniProt: Q8N4A0

Downloads

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