ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5obmC32 - ECOD Domain | ECOD

ECOD/Domains/e5obmC32

e5obmC32

UID: 002152882

PDB

Range: C3:2-82
PDB: 5OBM chain C3(all domains)
UniProt: P05756 (all domains)
Gene: RPS13

Molecule: 40S ribosomal protein S13

3D Structure

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Related Domains

Browse other domains in Ribosomal_S13_N →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-group40S ribosomal protein S13 N-terminal domain(101.40)

TT-group40S ribosomal protein S13 N-terminal domain(101.40.1)

FFamilyRibosomal_S13_N(101.40.1.1)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF08069Ribosomal_S13_N

Ribosomal S13/S15 N-terminal domain

External Links

ECOD PDB View: 5OBM RCSB PDB: 5OBM PDBe: 5OBM UniProt: P05756

Downloads

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