ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5orgB1 - ECOD Domain | ECOD

ECOD/Domains/e5orgB1

e5orgB1

UID: 002153149

PDB

Range: B:109-232
PDB: 5ORG chain B(all domains)
UniProt: P0A4F8 (all domains)
Gene: occT

Molecule: Octopine-binding periplasmic protein

3D Structure

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Related Domains

Browse other domains in this classification →

Classification

AArchitecture—

XX-group—

HH-group—

TT-group—

FFamily—

Ligands

in contact, ≤ 4 Å

octopine6DB
Chloride ionCL
Sodium ionNA
metal

+ 2 additives (Acetate, 1,2-ETHANEDIOL)

AcetateACT

External Links

ECOD PDB View: 5ORG RCSB PDB: 5ORG PDBe: 5ORG UniProt: P0A4F8

Downloads

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DrugBank DB14511

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.