ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5oynD1 - ECOD Domain | ECOD

ECOD/Domains/e5oynD1

e5oynD1

UID: 002153203

PDB

Range: D:381-591
PDB: 5OYN chain D(all domains)
UniProt: Q9A9Z2 (all domains)
Gene: xylD

Molecule: Dehydratase, IlvD/Edd family

3D Structure

Loading viewer...

Related Domains

Browse other domains in ILV_EDD_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupThe "swivelling" beta/beta/alpha domains(2487)

HH-groupThe "swivelling" beta/beta/alpha domain(2487.1)

TT-groupThe "swivelling" beta/beta/alpha domain(2487.1.1)

FFamilyILV_EDD_C(2487.1.1.19)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF24877ILV_EDD_C

Dihydroxy-acid/6-phosphogluconate dehydratase C-terminal

ClanCL0364Leu-IlvD

External Links

ECOD PDB View: 5OYN RCSB PDB: 5OYN PDBe: 5OYN UniProt: Q9A9Z2

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure