ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ubiA1 - ECOD Domain | ECOD

ECOD/Domains/e5ubiA1

e5ubiA1

UID: 002153607

PDB

Range: A:4-102,A:192-221
PDB: 5UBI chain A(all domains)
UniProt: Q5HSJ4 (all domains)
Gene: hisG

Molecule: ATP phosphoribosyltransferase

3D Structure

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Related Domains

Browse other domains in HisG →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyHisG(7523.1.1.10)

Ligands

in contact, ≤ 4 Å

5-O-phosphono-alpha-D-ribofuranosyl diphosphatePRP
drugDrugBank DB01632
Magnesium ionMG
metal
Zinc ion

Pfam Families

ATP phosphoribosyltransferase

ClanCL0177PBP

External Links

ECOD PDB View: 5UBI RCSB PDB: 5UBI PDBe: 5UBI UniProt: Q5HSJ4

Downloads

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metal

+ 1 additive (Acetate ion)

Acetate ionACT

Shown in the structure viewer. Drug annotations from DrugDomain.