ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5ubvB2 - ECOD Domain | ECOD

ECOD/Domains/e5ubvB2

e5ubvB2

UID: 002153612

PDB

Range: B:2-172
PDB: 5UBV chain B(all domains)
UniProt: G2QPI5 (all domains)
Gene: MYCTH_2311706

Molecule: ATPase domain of i-AAA protease

3D Structure

Loading viewer...

Related Domains

Browse other domains in AAA, TIP49 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyAAA, TIP49(2004.1.1.420)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833

+ 2 additives (Glycerin, Citric acid)

GlycerinGOL
DrugBank DB09462

Pfam Families

ATPase family associated with various cellular activities (AAA)

ClanCL0023P-loop_NTPase

TIP49 P-loop domain

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 5UBV RCSB PDB: 5UBV PDBe: 5UBV UniProt: G2QPI5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Citric acidCIT

DrugBank DB04272within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.