ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5uphA1 - ECOD Domain | ECOD

ECOD/Domains/e5uphA1

e5uphA1

UID: 002153729

PDB

Range: A:51-236,A:258-429
PDB: 5UPH chain A(all domains)
UniProt: Q14108 (all domains)
Gene: SCARB2

Molecule: Lysosome membrane protein 2

3D Structure

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Related Domains

Browse other domains in CD36 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupLysosome membrane protein 2 lumenal domain(3775)

HH-groupLysosome membrane protein 2 lumenal domain(3775.1)

TT-groupLysosome membrane protein 2 lumenal domain(3775.1.1)

FFamilyCD36(3775.1.1.1)

Ligands

in contact, ≤ 4 Å

CholesterolCLR
drugDrugBank DB04540
(Z,Z)-4-Hydroxy-N,N,N-Trimethyl-10-Oxo-7-[(1-Oxo-9-Octadecenyl)Oxy]-3,5,9-Trioxa-4-Phosphaheptacos-18-En-1-Aminium-4-OxidePCW
drug

Pfam Families

CD36 family

ClanCL0967CD36

External Links

ECOD PDB View: 5UPH RCSB PDB: 5UPH PDBe: 5UPH UniProt: Q14108

Downloads

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DrugBank DB03690

Shown in the structure viewer. Drug annotations from DrugDomain.