ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5vfjB1 - ECOD Domain | ECOD

ECOD/Domains/e5vfjB1

e5vfjB1

UID: 002153776

PDB

Range: B:1-133
PDB: 5VFJ chain B(all domains)
UniProt: Q9IAT9 (all domains)

Molecule: Basic phospholipase A2 homolog BnSP-7

3D Structure

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Related Domains

Browse other domains in Phospholip_A2_1 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupPhospholipase A2, PLA2(371)

HH-groupPhospholipase A2, PLA2(371.1)

TT-groupPhospholipase A2, PLA2(371.1.1)

FFamilyPhospholip_A2_1(371.1.1.1)

Ligands

in contact, ≤ 4 Å

3,4-Dihydroxycinnamic AcidDHC
drugDrugBank DB01880

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer.

Pfam Families

PF00068Phospholip_A2_1

Phospholipase A2

ClanCL0629PLA2

External Links

ECOD PDB View: 5VFJ RCSB PDB: 5VFJ PDBe: 5VFJ UniProt: Q9IAT9

Downloads

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Drug annotations from DrugDomain.