ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5vjnB1 - ECOD Domain | ECOD

ECOD/Domains/e5vjnB1

e5vjnB1

UID: 002153792

PDB

Range: B:3-178
PDB: 5VJN chain B(all domains)
UniProt: P49435 (all domains)
Gene: APT1

Molecule: Adenine phosphoribosyltransferase 1

3D Structure

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Related Domains

Browse other domains in Pribosyltran →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPRTase-like(7573)

HH-groupPRTase-like(7573.1)

TT-groupPRTase-like(7573.1.1)

FFamilyPribosyltran(7573.1.1.1)

Ligands

in contact, ≤ 4 Å

[(2R,3S,4R,5R)-3,4-dihydroxypyrrolidine-2,5-diyl]bis(methylene) bis[dihydrogen (phosphate)]IR8

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00156Pribosyltran

Phosphoribosyl transferase domain

ClanCL0533PRTase-like

External Links

ECOD PDB View: 5VJN RCSB PDB: 5VJN PDBe: 5VJN UniProt: P49435

Downloads

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