ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5w8xA2 - ECOD Domain | ECOD

ECOD/Domains/e5w8xA2

e5w8xA2

UID: 002153952

PDB

Range: A:5-171
PDB: 5W8X chain A(all domains)
UniProt: P10441 (all domains)
Gene: lpxB

Molecule: Lipid-A-disaccharide synthase

3D Structure

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Related Domains

Browse other domains in LpxB →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512)

HH-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512.1)

TT-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512.1.1)

FFamilyLpxB(7512.1.1.9)

Ligands

in contact, ≤ 4 Å

Uridine-5'-DiphosphateUDP
drugDrugBank DB03435within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Lipid-A-disaccharide synthetase

ClanCL0113GT-B

External Links

ECOD PDB View: 5W8X RCSB PDB: 5W8X PDBe: 5W8X UniProt: P10441

Downloads

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