ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5webA1 - ECOD Domain | ECOD

ECOD/Domains/e5webA1

e5webA1

UID: 002153999

PDB

Range: A:1-195
PDB: 5WEB chain A(all domains)
UniProt: C3W5S0 (all domains)
Gene: PA

Molecule: Polymerase acidic protein

3D Structure

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Related Domains

Browse other domains in Flu_PA →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRestriction endonuclease-like(2008)

HH-groupRestriction endonuclease-like(2008.1)

TT-groupRestriction endonuclease-like(2008.1.1)

FFamilyFlu_PA(2008.1.1.1)

Ligands

in contact, ≤ 4 Å

2-[(2S)-1-{[(2-chlorophenyl)sulfanyl]acetyl}pyrrolidin-2-yl]-5-hydroxy-6-oxo-N-[2-(phenylsulfonyl)ethyl]-1,6-dihydropyrimidine-4-carboxamideKU5
MANGANESE (II) IONMN
metal

+ 1 additive (Sulfate ion)

Pfam Families

Influenza RNA-dependent RNA polymerase subunit PA

ClanCL0236PDDEXK

External Links

ECOD PDB View: 5WEB RCSB PDB: 5WEB PDBe: 5WEB UniProt: C3W5S0

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sulfate ion

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.