ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5x06G1 - ECOD Domain | ECOD

ECOD/Domains/e5x06G1

e5x06G1

UID: 002154302

PDB

Range: G:5-164
PDB: 5X06 chain G(all domains)
UniProt: P69933 (all domains)
Gene: hda

Molecule: DnaA regulatory inactivator Hda

3D Structure

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Related Domains

Browse other domains in Bac_DnaA →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyBac_DnaA(2004.1.1.35)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833
Magnesium ionMG
metal

+ 1 additive (Glycerin)

Pfam Families

PF00308Bac_DnaA

Bacterial DnaA ATPAse domain

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 5X06 RCSB PDB: 5X06 PDBe: 5X06 UniProt: P69933

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

GlycerinGOL

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.