ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5xk6B1 - ECOD Domain | ECOD

ECOD/Domains/e5xk6B1

e5xk6B1

UID: 002154424

PDB

Range: B:1-209
PDB: 5XK6 chain B(all domains)
UniProt: M4T4U9 (all domains)
Gene: mcl22

Molecule: Undecaprenyl diphosphate synthase

3D Structure

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Related Domains

Browse other domains in Prenyltransf →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupUndecaprenyl diphosphate synthase(7534)

HH-groupUndecaprenyl diphosphate synthase(7534.1)

TT-groupUndecaprenyl diphosphate synthase(7534.1.1)

FFamilyPrenyltransf(7534.1.1.1)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal
PYROPHOSPHATE 2-POP

+ 1 additive (Sulfate ion)

Sulfate ionSO4

Pfam Families

PF01255Prenyltransf

Putative undecaprenyl diphosphate synthase

External Links

ECOD PDB View: 5XK6 RCSB PDB: 5XK6 PDBe: 5XK6 UniProt: M4T4U9

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.