ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5xnpB2 - ECOD Domain | ECOD

ECOD/Domains/e5xnpB2

e5xnpB2

UID: 002154467

PDB

Range: B:284-374
PDB: 5XNP chain B(all domains)
UniProt: Q96NI6 (all domains)
Gene: LRFN5

Molecule: Leucine-rich repeat and fibronectin type-III domain-containing protein 5

3D Structure

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Related Domains

Browse other domains in Ig_3 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyIg_3(11.1.1.179)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141
Calcium ionCA
metal

+ 1 additive (Sulfate ion)

Pfam Families

Immunoglobulin domain

ClanCL0159E-set

External Links

ECOD PDB View: 5XNP RCSB PDB: 5XNP PDBe: 5XNP UniProt: Q96NI6

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sulfate ionSO4

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.