ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5xspB1 - ECOD Domain | ECOD

ECOD/Domains/e5xspB1

e5xspB1

UID: 002154495

PDB

Range: B:319-540
PDB: 5XSP chain B(all domains)
UniProt: A0A0U1MUE2 (all domains)
Gene: cdnD

Molecule: Phosphodiesterase acting on cyclic dinucleotides

3D Structure

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Related Domains

Browse other domains in DHH →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHAD domain-like(2006)

HH-groupHAD domain-related(2006.1)

TT-groupDHH phosphoesterases(2006.1.2)

FFamilyDHH(2006.1.2.1)

Ligands

in contact, ≤ 4 Å

MANGANESE (II) IONMN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

DHH family, N-terminal domain

ClanCL0137HAD

External Links

ECOD PDB View: 5XSP RCSB PDB: 5XSP PDBe: 5XSP UniProt: A0A0U1MUE2

Downloads

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