ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5xt3B2 - ECOD Domain | ECOD

ECOD/Domains/e5xt3B2

e5xt3B2

UID: 002154500

PDB

Range: B:578-688
PDB: 5XT3 chain B(all domains)
UniProt: A0A0U1MUE2 (all domains)
Gene: cdnD

Molecule: Phosphodiesterase acting on cyclic dinucleotides

3D Structure

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Related Domains

Browse other domains in DHHA1 →

Classification

AArchitecturea+b three layers(a.12)

XX-groupC-terminal domain in DHH phosphoesterases(5104)

HH-groupC-terminal domain in DHH phosphoesterases(5104.1)

TT-groupC-terminal domain in DHH phosphoesterases(5104.1.1)

FFamilyDHHA1(5104.1.1.1)

Ligands

in contact, ≤ 4 Å

9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one)C2E

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

DHHA1 domain

External Links

ECOD PDB View: 5XT3 RCSB PDB: 5XT3 PDBe: 5XT3 UniProt: A0A0U1MUE2

Downloads

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