ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ybnA1 - ECOD Domain | ECOD

ECOD/Domains/e5ybnA1

e5ybnA1

UID: 002154818

PDB

Range: A:6-294
PDB: 5YBN chain A(all domains)
UniProt: A0A1E1FFL0 (all domains)
Gene: prhA

Molecule: PrhA

3D Structure

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Related Domains

Browse other domains in PhyH →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamilyPhyH(10.12.1.25)

Ligands

in contact, ≤ 4 Å

Oxogluric acidAKG
drugDrugBank DB08845
FE (III) IONFE
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Phytanoyl-CoA dioxygenase (PhyH)

ClanCL0029Cupin

External Links

ECOD PDB View: 5YBN RCSB PDB: 5YBN PDBe: 5YBN UniProt: A0A1E1FFL0

Downloads

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